1. Home
  2. Species
  3. Stenochlaena palustris
  4. Sequence
  5. Spa_g51810

Spa_g51810 (BTR1S, BTR1, BTR1L)


Aliases : BTR1S, BTR1, BTR1L

Description : virus infection resistance factor *(BTR1) & original description: none


Gene families : OG0002537 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002537_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g51810

Target Alias Description ECC score Gene Family Method Actions
AT5G04430 BTR1S, BTR1, BTR1L binding to TOMV RNA 1L (long form) 0.03 OrthoFinder output from all 47 species
Ala_g01506 BTR1S, BTR1, BTR1L virus infection resistance factor *(BTR1) & original... 0.02 OrthoFinder output from all 47 species
Als_g07772 BTR1S, BTR1, BTR1L virus infection resistance factor *(BTR1) & original... 0.05 OrthoFinder output from all 47 species
Aob_g15094 BTR1S, BTR1, BTR1L virus infection resistance factor *(BTR1) & original... 0.02 OrthoFinder output from all 47 species
Ceric.26G033000.1 BTR1S, BTR1,... virus infection resistance factor *(BTR1) & original... 0.04 OrthoFinder output from all 47 species
Len_g48574 BTR1S, BTR1, BTR1L virus infection resistance factor *(BTR1) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g32322 BTR1S, BTR1, BTR1L virus infection resistance factor *(BTR1) & original... 0.02 OrthoFinder output from all 47 species
Ore_g20853 BTR1S, BTR1, BTR1L virus infection resistance factor *(BTR1) & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0010274 hydrotropism IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 113 178
IPR004088 KH_dom_type_1 262 297
IPR004088 KH_dom_type_1 31 94
No external refs found!