1. Home
  2. Species
  3. Stenochlaena palustris
  4. Sequence
  5. Spa_g51246

Spa_g51246 (HAI3)


Aliases : HAI3

Description : not classified & original description: none


Gene families : OG0000226 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000226_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g51246

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00129440 AtABI1, ABI1,... Protein modification.dephosphorylation.serine/threonine... 0.02 OrthoFinder output from all 47 species
AMTR_s00146p00095280 HAB1,... Protein modification.dephosphorylation.serine/threonine... 0.02 OrthoFinder output from all 47 species
Adi_g016833 AtABI1, ABI1 clade A phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g055180 AtABI2, ABI2 clade A phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g059353 HAB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g14990 HAB2 clade A phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11366 AtABI1, ABI1 clade A phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g03957 HAB1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01015156001 HAB1 Protein modification.dephosphorylation.serine/threonine... 0.02 OrthoFinder output from all 47 species
Gb_07154 AtABI2, ABI2 regulatory phosphatase component of cytoplasm-localized... 0.02 OrthoFinder output from all 47 species
Gb_40094 AtABI2, ABI2 regulatory phosphatase component of cytoplasm-localized... 0.02 OrthoFinder output from all 47 species
Len_g15263 HAB2 clade A phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26511 PP2CA, ATPP2CA, AHG3 clade A phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48427 AtABI1, ABI1 clade A phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g06683 PP2CA, ATPP2CA, AHG3 clade A phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g44503 HAI1 clade A phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g10913 HAB1 clade A phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g58486 PP2CA, ATPP2CA, AHG3 clade A phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g66404 AtABI1, ABI1 clade A phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0178.g024710 HAB1 clade A phosphatase & original description: CDS=1-1767 0.03 OrthoFinder output from all 47 species
Solyc03g006940.3.1 AHG1, Solyc03g006940 clade A phosphatase 0.03 OrthoFinder output from all 47 species
Solyc03g006950.3.1 AHG1, Solyc03g006950 clade A phosphatase 0.02 OrthoFinder output from all 47 species
Solyc08g062640.3.1 HAB1, Solyc08g062640 Probable protein phosphatase 2C 6 OS=Oryza sativa subsp.... 0.01 OrthoFinder output from all 47 species
Tin_g27654 AtABI1, ABI1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e001189_P001 HAI2, Zm00001e001189 clade A phosphatase 0.02 OrthoFinder output from all 47 species
Zm00001e027771_P002 HAB2, Zm00001e027771 regulatory phosphatase component of cytoplasm-localized... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000175 3'-5'-exoribonuclease activity IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0004532 exoribonuclease activity IEP HCCA
MF GO:0004535 poly(A)-specific ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0016896 exoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!