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  5. Spa_g50942

Spa_g50942


Description : not classified & original description: none


Gene families : OG0000315 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000315_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g50942
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
AT4G17680 No alias SBP (S-ribonuclease binding protein) family protein 0.05 OrthoFinder output from all 47 species
Aob_g23926 SBP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene62396.t1 SBP1, Aspi01Gene62396 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G040700.1 Ceric.13G040700 not classified & original description: pacid=50635980... 0.03 OrthoFinder output from all 47 species
Dac_g02764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00854 SBP1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_15555 No alias Probable BOI-related E3 ubiquitin-protein ligase 2... 0.03 OrthoFinder output from all 47 species
LOC_Os04g32980.1 LOC_Os04g32980 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pnu_g19388 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019218 No alias not classified & original description: CDS=378-1583 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005199 structural constituent of cell wall IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!