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  4. Sequence
  5. Spa_g50939

Spa_g50939


Description : not classified & original description: none


Gene families : OG0000090 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000090_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g50939
Cluster HCCA: Cluster_187

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00268350 evm_27.TU.AmTr_v1... Heavy metal-associated isoprenylated plant protein 37... 0.02 OrthoFinder output from all 47 species
AMTR_s00076p00095550 evm_27.TU.AmTr_v1... Heavy metal-associated isoprenylated plant protein 31... 0.02 OrthoFinder output from all 47 species
AT1G23000 No alias Heavy metal transport/detoxification superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G28660 No alias Chloroplast-targeted copper chaperone protein 0.02 OrthoFinder output from all 47 species
AT5G27690 No alias Heavy metal transport/detoxification superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g35875 NAKR1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26598 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g02125 CCH copper chaperone *(ATX/CCH) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g09201 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g11434 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11821 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12403 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14499 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15054 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g38327 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05646 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g46375 HIPP20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G003100.1 Ceric.07G003100 not classified & original description: pacid=50627854... 0.05 OrthoFinder output from all 47 species
Ceric.07G039600.1 Ceric.07G039600 not classified & original description: pacid=50627588... 0.04 OrthoFinder output from all 47 species
Ceric.10G055100.1 Ceric.10G055100 not classified & original description: pacid=50611673... 0.04 OrthoFinder output from all 47 species
Ceric.37G066200.1 Ceric.37G066200 not classified & original description: pacid=50616043... 0.03 OrthoFinder output from all 47 species
Dac_g12205 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g19504 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22666 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17806 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g02639 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g22999 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g30594 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_2102175g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g08425 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g39368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g00563 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g17258 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24399 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g30963 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g00614 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g21772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g28282 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g46502 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12635 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g31125 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g35651 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e029729_P001 Zm00001e029729 Heavy metal-associated isoprenylated plant protein 36... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0006597 spermine biosynthetic process IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
BP GO:0008215 spermine metabolic process IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
BP GO:0008295 spermidine biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006121 HMA_dom 73 129
No external refs found!