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  5. Spa_g50845

Spa_g50845


Description : not classified & original description: none


Gene families : OG0000085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g50845
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00095700 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00023p00077180 evm_27.TU.AmTr_v1... B2 protein OS=Daucus carota 0.02 OrthoFinder output from all 47 species
Adi_g003400 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g004478 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g035185 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g113900 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g115740 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g05248 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aev_g07932 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g01488 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g14673 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04358 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07809 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09280 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g13345 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18305 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20204 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.15G041200.1 Ceric.15G041200 not classified & original description: pacid=50639654... 0.03 OrthoFinder output from all 47 species
Ceric.28G013700.1 Ceric.28G013700 not classified & original description: pacid=50569930... 0.05 OrthoFinder output from all 47 species
Dac_g10545 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g28553 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01030266001 No alias B2 protein OS=Daucus carota 0.03 OrthoFinder output from all 47 species
Gb_04338 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 90.9) 0.03 OrthoFinder output from all 47 species
LOC_Os01g36950.1 LOC_Os01g36950 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 252.0) 0.03 OrthoFinder output from all 47 species
LOC_Os05g07220.1 LOC_Os05g07220 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 112.0) 0.02 OrthoFinder output from all 47 species
LOC_Os11g32270.1 LOC_Os11g32270 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g02891 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08285 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11033 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37658 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_121889g0010 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 98.2) 0.04 OrthoFinder output from all 47 species
MA_15917g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g21920.1 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 92.4) 0.02 OrthoFinder output from all 47 species
Msp_g09646 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03623 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g04165 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g42630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10104 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11178 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g13486 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g15717 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g09271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013443 No alias not classified & original description: CDS=271-3063 0.03 OrthoFinder output from all 47 species
Solyc06g005570.4.1 Solyc06g005570 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 81.6) 0.04 OrthoFinder output from all 47 species
Spa_g06576 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g09126 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e023900_P003 Zm00001e023900 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e030859_P001 Zm00001e030859 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR013989 Dev_and_cell_death_domain 1 81
No external refs found!