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  5. Spa_g50680

Spa_g50680


Description : deubiquitinase recruiting protein *(BRO1) & original description: none


Gene families : OG0001827 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001827_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g50680

Target Alias Description ECC score Gene Family Method Actions
AT1G15130 No alias Endosomal targeting BRO1-like domain-containing protein 0.03 OrthoFinder output from all 47 species
Adi_g057704 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g076949 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.03 OrthoFinder output from all 47 species
Aev_g03347 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.02 OrthoFinder output from all 47 species
Aev_g04818 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.02 OrthoFinder output from all 47 species
Als_g08520 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.02 OrthoFinder output from all 47 species
Als_g33980 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.03 OrthoFinder output from all 47 species
Als_g63387 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02609 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.05 OrthoFinder output from all 47 species
Ceric.27G033300.1 Ceric.27G033300 deubiquitinase recruiting protein *(BRO1) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g07127 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.05 OrthoFinder output from all 47 species
Dde_g21520 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01011794001 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.04 OrthoFinder output from all 47 species
Gb_12639 No alias deubiquitinase recruiting protein (BRO1) 0.04 OrthoFinder output from all 47 species
Lfl_g02220 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.03 OrthoFinder output from all 47 species
MA_20694g0010 No alias deubiquitinase recruiting protein (BRO1) 0.03 OrthoFinder output from all 47 species
Mp3g15580.1 No alias deubiquitinase recruiting protein (BRO1) 0.02 OrthoFinder output from all 47 species
Nbi_g03810 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.04 OrthoFinder output from all 47 species
Ore_g17456 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.04 OrthoFinder output from all 47 species
Pir_g13021 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.02 OrthoFinder output from all 47 species
Smo102692 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.04 OrthoFinder output from all 47 species
Solyc04g007560.3.1 Solyc04g007560 deubiquitinase recruiting protein (BRO1) 0.02 OrthoFinder output from all 47 species
Zm00001e004485_P001 Zm00001e004485 deubiquitinase recruiting protein (BRO1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019786 Atg8-specific peptidase activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR025304 ALIX_V_dom 425 710
IPR004328 BRO1_dom 11 388
No external refs found!