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  5. Spa_g50617

Spa_g50617 (IQD6)


Aliases : IQD6

Description : not classified & original description: none


Gene families : OG0001294 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001294_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g50617
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00158910 iqd9,... Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00109p00027450 IQD6,... Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT1G72670 iqd8 IQ-domain 8 0.05 OrthoFinder output from all 47 species
Aop_g00647 IQD6 not classified & original description: none 0.14 OrthoFinder output from all 47 species
Aspi01Gene15912.t1 IQD6, Aspi01Gene15912 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0027.g023688 IQD6 not classified & original description: CDS=350-1708 0.03 OrthoFinder output from all 47 species
Ceric.09G101400.1 IQD6, Ceric.09G101400 not classified & original description: pacid=50587571... 0.09 OrthoFinder output from all 47 species
Dac_g00730 IQD6 not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01035382001 IQD6 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.11 OrthoFinder output from all 47 species
Gb_01817 IQD6 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
LOC_Os01g09790.1 IQD6, LOC_Os01g09790 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g04277 IQD6 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g32341 IQD6 not classified & original description: none 0.15 OrthoFinder output from all 47 species
Nbi_g24119 IQD6 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Ppi_g14460 IQD6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25102 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g062940.4.1 IQD6, Solyc08g062940 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Tin_g05096 IQD6 not classified & original description: none 0.18 OrthoFinder output from all 47 species
Zm00001e020006_P001 IQD6, Zm00001e020006 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e032277_P001 IQD6, Zm00001e032277 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000776 kinetochore IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0031262 Ndc80 complex IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 209 228
IPR000048 IQ_motif_EF-hand-BS 234 248
IPR025064 DUF4005 481 518
No external refs found!