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  5. Spa_g50490

Spa_g50490 (ATISA3, ISA3)


Aliases : ATISA3, ISA3

Description : starch-debranching isoamylase *(ISA3) & original description: none


Gene families : OG0001139 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001139_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g50490
Cluster HCCA: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00193210 ATISA1, ISA1,... Carbohydrate metabolism.starch... 0.02 OrthoFinder output from all 47 species
AT1G03310 DBE1, ATISA2, BE2, ISA2 debranching enzyme 1 0.03 OrthoFinder output from all 47 species
AT2G39930 ATISA1, ISA1 isoamylase 1 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000550 ATISA3, ISA3 starch-debranching isoamylase *(ISA3) & original... 0.03 OrthoFinder output from all 47 species
Ceric.31G027800.1 ATISA1, ISA1,... component *(ISA1) of ISA1-ISA2 isoamylase heterodimer &... 0.05 OrthoFinder output from all 47 species
Cre17.g698850 ATISA3, ISA3 Isoamylase 2, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc06g009220.4.1 ATISA3, ISA3,... starch debranching enzyme. starch-debranching... 0.03 OrthoFinder output from all 47 species
Solyc07g014590.4.1 ATISA1, ISA1,... starch debranching enzyme. starch-debranching... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009092 homoserine metabolic process IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
BP GO:0019346 transsulfuration IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0050667 homocysteine metabolic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006047 Glyco_hydro_13_cat_dom 285 391
IPR004193 Glyco_hydro_13_N 122 215
No external refs found!