1. Home
  2. Species
  3. Stenochlaena palustris
  4. Sequence
  5. Spa_g49982

Spa_g49982


Description : regulatory protein *(ZC11A) of mRNA export & original description: none


Gene families : OG0001116 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001116_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g49982
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
Adi_g059321 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.05 OrthoFinder output from all 47 species
Adi_g075164 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.03 OrthoFinder output from all 47 species
Ala_g11644 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.02 OrthoFinder output from all 47 species
Als_g14554 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.04 OrthoFinder output from all 47 species
Als_g16095 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.02 OrthoFinder output from all 47 species
Aop_g09712 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.03 OrthoFinder output from all 47 species
Aop_g13084 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene60490.t1 Aspi01Gene60490 regulatory protein *(ZC11A) of mRNA export & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007855 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.03 OrthoFinder output from all 47 species
Cba_g13222 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.05 OrthoFinder output from all 47 species
Cba_g39083 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.03 OrthoFinder output from all 47 species
Ceric.12G089800.1 Ceric.12G089800 regulatory protein *(ZC11A) of mRNA export & original... 0.03 OrthoFinder output from all 47 species
Ceric.21G028800.1 Ceric.21G028800 regulatory protein *(ZC11A) of mRNA export & original... 0.04 OrthoFinder output from all 47 species
Ceric.23G004600.1 Ceric.23G004600 regulatory protein *(ZC11A) of mRNA export & original... 0.03 OrthoFinder output from all 47 species
Dac_g05770 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.02 OrthoFinder output from all 47 species
Dac_g29062 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.08 OrthoFinder output from all 47 species
Dac_g31773 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.03 OrthoFinder output from all 47 species
LOC_Os04g57600.1 LOC_Os04g57600 C3H zinc finger transcription factor. regulatory... 0.02 OrthoFinder output from all 47 species
Len_g08778 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.03 OrthoFinder output from all 47 species
Lfl_g04919 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.05 OrthoFinder output from all 47 species
Lfl_g04961 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.04 OrthoFinder output from all 47 species
Mp2g02990.1 No alias C3H zinc finger transcription factor. regulatory... 0.02 OrthoFinder output from all 47 species
Msp_g06797 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.05 OrthoFinder output from all 47 species
Msp_g15407 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.03 OrthoFinder output from all 47 species
Nbi_g03124 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.03 OrthoFinder output from all 47 species
Nbi_g07404 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.05 OrthoFinder output from all 47 species
Pir_g09783 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.03 OrthoFinder output from all 47 species
Pir_g10434 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.03 OrthoFinder output from all 47 species
Ppi_g28993 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.02 OrthoFinder output from all 47 species
Smo441325 No alias RNA processing.messenger ribonucleoprotein particle... 0.03 OrthoFinder output from all 47 species
Solyc01g008170.3.1 Solyc01g008170 C3H zinc finger transcription factor. regulatory... 0.03 OrthoFinder output from all 47 species
Solyc04g008550.4.1 Solyc04g008550 C3H zinc finger transcription factor. regulatory... 0.02 OrthoFinder output from all 47 species
Spa_g17319 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.03 OrthoFinder output from all 47 species
Tin_g12003 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
InterPro domains Description Start Stop
IPR041686 Znf-CCCH_3 11 65
No external refs found!