1. Home
  2. Species
  3. Stenochlaena palustris
  4. Sequence
  5. Spa_g49981

Spa_g49981 (DYAD, SWI1)


Aliases : DYAD, SWI1

Description : regulatory protein *(DYAD/SWI1) of meiotic recombination & original description: none


Gene families : OG0003886 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003886_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g49981
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00232360 DYAD, SWI1,... Cell cycle.mitosis and meiosis.meiotic... 0.02 OrthoFinder output from all 47 species
Ceric.24G022600.1 DYAD, SWI1,... regulatory protein *(DYAD/SWI1) of meiotic recombination... 0.06 OrthoFinder output from all 47 species
GSVIVT01003609001 DYAD, SWI1 Cell cycle.mitosis and meiosis.meiotic... 0.03 OrthoFinder output from all 47 species
LOC_Os03g44760.1 DYAD, SWI1,... DYAD/SWI1 meiotic recombination regulating protein 0.02 OrthoFinder output from all 47 species
Len_g56992 DYAD, SWI1 regulatory protein *(DYAD/SWI1) of meiotic recombination... 0.04 OrthoFinder output from all 47 species
Ore_g40063 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43046 DYAD, SWI1 regulatory protein *(DYAD/SWI1) of meiotic recombination... 0.05 OrthoFinder output from all 47 species
Ore_g43047 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc03g093370.2.1 DYAD, SWI1,... DYAD/SWI1 meiotic recombination regulating protein 0.05 OrthoFinder output from all 47 species
Zm00001e012383_P003 DYAD, SWI1,... DYAD/SWI1 meiotic recombination regulating protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001025 BAH_dom 29 146
No external refs found!