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  5. Spa_g49861

Spa_g49861


Description : EPF-peptide co-receptor *(TMM) & original description: none


Gene families : OG0001645 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001645_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g49861
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g52880.1 RLP29, AtRLP29,... Receptor like protein 29 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Nbi_g23103 RLP29, AtRLP29 EPF-peptide co-receptor *(TMM) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12095 RLP29, AtRLP29 EPF-peptide co-receptor *(TMM) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 318 377
IPR001611 Leu-rich_rpt 245 304
IPR001611 Leu-rich_rpt 221 243
No external refs found!