1. Home
  2. Species
  3. Stenochlaena palustris
  4. Sequence
  5. Spa_g49555

Spa_g49555


Description : not classified & original description: none


Gene families : OG0007910 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007910_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g49555
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
Ala_g24401 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g29001 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g06608 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aspi01Gene26429.t1 Aspi01Gene26429 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Aspi01Gene33241.t1 Aspi01Gene33241 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g11192 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Gb_17717 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g30923 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
MA_160022g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Mp1g13490.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Msp_g05992 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Nbi_g06684 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
Ppi_g16459 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g12293 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!