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  5. Spa_g49348

Spa_g49348


Description : not classified & original description: none


Gene families : OG0000085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g49348
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
Adi_g058263 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g071576 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g115323 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05577.t1 Aspi01Gene05577 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46167 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07327 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g13338 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04078 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g04136 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g050610.3.1 Solyc06g050610 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 102.0) 0.02 OrthoFinder output from all 47 species
Solyc10g076330.3.1 Solyc10g076330 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 118.0) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013989 Dev_and_cell_death_domain 123 248
No external refs found!