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  5. Spa_g49048

Spa_g49048


Description : not classified & original description: none


Gene families : OG0001668 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001668_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g49048
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
Mp2g15410.1 No alias peptidyl-prolyl isomerase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000976 transcription cis-regulatory region binding IEP HCCA
MF GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding IEP HCCA
MF GO:0001067 transcription regulatory region nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0010257 NADH dehydrogenase complex assembly IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0032422 purine-rich negative regulatory element binding IEP HCCA
BP GO:0032981 mitochondrial respiratory chain complex I assembly IEP HCCA
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP HCCA
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:1990837 sequence-specific double-stranded DNA binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!