Spa_g49020 (CLA, DXS, CLA1, DEF, DXPS2)

Aliases : CLA, DXS, CLA1, DEF, DXPS2

Description : EC_2.2 transferase transferring aldehyde or ketonic group & original description: none

Gene families : OG0001325 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001325_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g49020

Target	Alias	Description	ECC score	Gene Family Method
AT3G21500	DXPS1	1-deoxy-D-xylulose 5-phosphate synthase 1	0.03	OrthoFinder output from all 47 species
Aop_g04601	CLA, DXS, CLA1,...	EC_2.2 transferase transferring aldehyde or ketonic...	0.03	OrthoFinder output from all 47 species
Ceric.03G098900.1	CLA, DXS, CLA1,...	EC_2.2 transferase transferring aldehyde or ketonic...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000217.39	CLA, DXS, CLA1,...	Secondary metabolism.terpenoids.methylerythritol...	0.02	OrthoFinder output from all 47 species
Cre07.g356350	CLA, DXS, CLA1,...	Secondary metabolism.terpenoids.methylerythritol...	0.01	OrthoFinder output from all 47 species
Gb_22616	CLA, DXS, CLA1,...	1-deoxy-D-xylulose 5-phosphate synthase (DXS)	0.02	OrthoFinder output from all 47 species
LOC_Os07g09190.1	CLA, DXS, CLA1,...	1-deoxy-D-xylulose 5-phosphate synthase (DXS)	0.03	OrthoFinder output from all 47 species
MA_97345g0010	CLA, DXS, CLA1,...	1-deoxy-D-xylulose 5-phosphate synthase (DXS)	0.02	OrthoFinder output from all 47 species
Ore_g16097	CLA, DXS, CLA1,...	EC_2.2 transferase transferring aldehyde or ketonic...	0.02	OrthoFinder output from all 47 species
Ppi_g29782	CLA, DXS, CLA1,...	EC_2.2 transferase transferring aldehyde or ketonic...	0.03	OrthoFinder output from all 47 species
Sam_g49046	No alias	EC_2.2 transferase transferring aldehyde or ketonic...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0006721	terpenoid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
MF	GO:0008661	1-deoxy-D-xylulose-5-phosphate synthase activity	IEA	Interproscan
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016114	terpenoid biosynthetic process	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016744	transketolase or transaldolase activity	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004222	metalloendopeptidase activity	IEP	HCCA
MF	GO:0005215	transporter activity	IEP	HCCA
BP	GO:0006364	rRNA processing	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0022857	transmembrane transporter activity	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051180	vitamin transport	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
MF	GO:0090482	vitamin transmembrane transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR033248	Transketolase_C	577	700
IPR005475	Transketolase-like_Pyr-bd	399	559
IPR005477	Dxylulose-5-P_synthase	76	361

External Links

No external refs found!