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  5. Spa_g48546

Spa_g48546 (ATEXPA10, AT-EXP10,...)


Aliases : ATEXPA10, AT-EXP10, ATEXP10, EXPA10, EXP10, ATHEXP ALPHA 1.1

Description : alpha-class expansin & original description: none


Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g48546

Target Alias Description ECC score Gene Family Method Actions
AT3G60570 ATHEXP BETA 1.3,... expansin B5 0.02 OrthoFinder output from all 47 species
Adi_g010993 ATEXPA10,... alpha-class expansin & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g17361 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17560 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18902 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32589 ATHEXP BETA 1.4,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g32738 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g20979 EXPB3, ATEXPB3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g32812 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07935 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07936 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g32260 EXP9, EXPA9,... alpha-class expansin & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g41940 ATEXP14, EXPA14,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g58865 ATHEXP BETA 1.4,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03666.t1 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene03667.t1 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene14796.t1 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene38493.t1 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene52233.t1 ATEXPA10,... alpha-class expansin & original description: none 0.09 OrthoFinder output from all 47 species
Cba_g09346 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15317 ATEXPA10,... alpha-class expansin & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g15318 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g56176 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.17G042200.1 ATEXPA10,... alpha-class expansin & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.29G045500.1 ATEXPA10,... alpha-class expansin & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g22602 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23608 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43609 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g25635 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g25653 EXPA8, ATHEXP... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26026 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g30387 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g41089 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g43799 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g50026 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31511 ATEXPA1, EXP1,... alpha-class expansin & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01004595001 ATHEXP BETA 3.1,... Cell wall.cell wall proteins.expansins.beta-like-type expansin 0.03 OrthoFinder output from all 47 species
GSVIVT01005915001 ATHEXP BETA 3.1,... Cell wall.cell wall proteins.expansins.beta-like-type expansin 0.03 OrthoFinder output from all 47 species
GSVIVT01025509001 ATEXPA10,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 OrthoFinder output from all 47 species
Len_g46726 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g25335 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Mp1g22720.1 ATEXPA4, ATEXP4,... Expansin-A4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp1g22730.1 EXP9, EXPA9,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Mp1g22740.1 ATEXPA1, EXP1,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Mp1g24230.1 EXP15, ATEXPA15,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Mp1g24390.1 EXPA6, ATEXP6,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Mp1g26350.1 ATEXP14, EXPA14,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Mp2g18600.1 ATEXPA4, ATEXP4,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Mp2g18610.1 ATEXPA4, ATEXP4,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Mp3g03930.1 ATEXPA1, EXP1,... alpha-class expansin 0.04 OrthoFinder output from all 47 species
Mp3g12280.1 ATEXPA3, EXP3,... alpha-class expansin 0.04 OrthoFinder output from all 47 species
Mp4g06560.1 EXPA16, ATHEXP... alpha-class expansin 0.04 OrthoFinder output from all 47 species
Mp5g01930.1 EXPA6, ATEXP6,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Nbi_g02659 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04247 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06079 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08040 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g28493 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g22080 EXPB3, ATEXPB3,... not classified & original description: none 0.1 OrthoFinder output from all 47 species
Pir_g28424 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.06 OrthoFinder output from all 47 species
Pp3c21_1850V3.1 ATEXPA10,... expansin A1 0.02 OrthoFinder output from all 47 species
Ppi_g08562 EXPB3, ATEXPB3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g42185 ATHEXP BETA 1.4,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g17657 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g38496 ATEXPA10,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e004713_P001 ATEXPA11, ATHEXP... alpha-class expansin 0.01 OrthoFinder output from all 47 species
Zm00001e017221_P001 ATEXPA1, EXP1,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Zm00001e017334_P001 ATEXPA10,... alpha-class expansin 0.01 OrthoFinder output from all 47 species
Zm00001e037879_P001 ATHEXP BETA 1.4,... Expansin-B3 OS=Oryza sativa subsp. japonica... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 63 149
IPR007117 Expansin_CBD 160 237
No external refs found!