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  5. Spa_g48416

Spa_g48416


Description : not classified & original description: none


Gene families : OG0005877 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005877_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g48416

Target Alias Description ECC score Gene Family Method Actions
AT1G06170 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G31220 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
Aop_g69486 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G094900.1 Ceric.14G094900 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
GSVIVT01011330001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
LOC_Os01g18870.1 LOC_Os01g18870 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Len_g59537 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_155093g0010 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Nbi_g30559 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g41320 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43808 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16733 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g081100.3.1 Solyc01g081100 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
CC GO:0031012 extracellular matrix IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA

No InterPro domains available for this sequence

No external refs found!