Spa_g48395 (CKS1AT, CKS1)

Aliases : CKS1AT, CKS1

Description : scaffold component *(CKS) of cyclin-dependent kinase complex & original description: none

Gene families : OG0002701 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002701_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g48395

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00140p00038880	evm_27.TU.AmTr_v1...	Cell cycle.regulation.cyclin-dependent kinase...	0.02	OrthoFinder output from all 47 species
AT2G27970	CKS2	CDK-subunit 2	0.05	OrthoFinder output from all 47 species
Als_g26996	CKS1AT, CKS1	scaffold component *(CKS) of cyclin-dependent kinase...	0.03	OrthoFinder output from all 47 species
Aop_g22173	CKS2	scaffold component *(CKS) of cyclin-dependent kinase...	0.12	OrthoFinder output from all 47 species
Ceric.02G054300.1	CKS1AT, CKS1,...	scaffold component *(CKS) of cyclin-dependent kinase...	0.03	OrthoFinder output from all 47 species
Ceric.20G054400.1	CKS1AT, CKS1,...	scaffold component *(CKS) of cyclin-dependent kinase...	0.07	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020780.5	No alias	Cell cycle.regulation.cyclin-dependent kinase...	0.07	OrthoFinder output from all 47 species
Cre03.g180350	No alias	Cell cycle.regulation.cyclin-dependent kinase...	0.08	OrthoFinder output from all 47 species
Dac_g26714	CKS2	scaffold component *(CKS) of cyclin-dependent kinase...	0.23	OrthoFinder output from all 47 species
Dde_g23860	CKS2	scaffold component *(CKS) of cyclin-dependent kinase...	0.03	OrthoFinder output from all 47 species
Gb_39695	CKS1AT, CKS1	scaffolding component CKS of cyclin-dependent kinase complex	0.04	OrthoFinder output from all 47 species
LOC_Os03g05300.1	LOC_Os03g05300	scaffolding component CKS of cyclin-dependent kinase complex	0.1	OrthoFinder output from all 47 species
Len_g41049	CKS1AT, CKS1	scaffold component *(CKS) of cyclin-dependent kinase...	0.14	OrthoFinder output from all 47 species
Lfl_g40067	CKS1AT, CKS1	scaffold component *(CKS) of cyclin-dependent kinase...	0.17	OrthoFinder output from all 47 species
MA_364061g0010	CKS1AT, CKS1	scaffolding component CKS of cyclin-dependent kinase complex	0.08	OrthoFinder output from all 47 species
Mp1g16700.1	No alias	scaffolding component CKS of cyclin-dependent kinase complex	0.09	OrthoFinder output from all 47 species
Msp_g29168	CKS1AT, CKS1	scaffold component *(CKS) of cyclin-dependent kinase...	0.07	OrthoFinder output from all 47 species
Nbi_g08553	CKS2	scaffold component *(CKS) of cyclin-dependent kinase...	0.16	OrthoFinder output from all 47 species
Pir_g65792	CKS2	scaffold component *(CKS) of cyclin-dependent kinase...	0.03	OrthoFinder output from all 47 species
Pp3c2_6200V3.1	Pp3c2_6200	CDK-subunit 2	0.03	OrthoFinder output from all 47 species
Sam_g26303	No alias	scaffold component *(CKS) of cyclin-dependent kinase...	0.09	OrthoFinder output from all 47 species
Smo92278	CKS1AT, CKS1	Cell cycle.regulation.cyclin-dependent kinase...	0.02	OrthoFinder output from all 47 species
Tin_g18395	CKS1AT, CKS1	scaffold component *(CKS) of cyclin-dependent kinase...	0.15	OrthoFinder output from all 47 species
Tin_g28369	CKS2	scaffold component *(CKS) of cyclin-dependent kinase...	0.03	OrthoFinder output from all 47 species
Zm00001e000375_P001	CKS1AT, CKS1,...	scaffolding component CKS of cyclin-dependent kinase complex	0.02	OrthoFinder output from all 47 species
Zm00001e038976_P001	CKS1AT, CKS1,...	scaffolding component CKS of cyclin-dependent kinase complex	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity	IEA	Interproscan
MF	GO:0019207	kinase regulator activity	None	Extended
MF	GO:0019887	protein kinase regulator activity	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
MF	GO:0098772	molecular function regulator activity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0008150	biological_process	IEP	HCCA
BP	GO:0009117	nucleotide metabolic process	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
BP	GO:0009262	deoxyribonucleotide metabolic process	IEP	HCCA
BP	GO:0009263	deoxyribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009987	cellular process	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
BP	GO:0018130	heterocycle biosynthetic process	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
BP	GO:0019637	organophosphate metabolic process	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
BP	GO:0032392	DNA geometric change	IEP	HCCA
BP	GO:0032508	DNA duplex unwinding	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
BP	GO:0051276	chromosome organization	IEP	HCCA
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	HCCA
BP	GO:0071103	DNA conformation change	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
BP	GO:0090407	organophosphate biosynthetic process	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	HCCA
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000789	Cyclin-dep_kinase_reg-sub	48	114

External Links

No external refs found!

Spa_g48395 (CKS1AT, CKS1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation