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  5. Spa_g47717

Spa_g47717


Description : regulatory protein of RNA homeostasis & original description: none


Gene families : OG0001312 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001312_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g47717
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
Aob_g14687 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Dac_g31175 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01018802001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.04 OrthoFinder output from all 47 species
LOC_Os04g56750.1 LOC_Os04g56750 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!