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  5. Spa_g47140

Spa_g47140


Description : substrate adaptor of CUL3-based E3 ubiquitin ligase complex & original description: none


Gene families : OG0000449 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000449_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g47140

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00155420 RPT3, NPH3,... Root phototropism protein 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT5G64330 RPT3, NPH3, JK218 Phototropic-responsive NPH3 family protein 0.02 OrthoFinder output from all 47 species
Ala_g32547 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Als_g08124 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Azfi_s0116.g046412 No alias not classified & original description: CDS=1316-3601 0.04 OrthoFinder output from all 47 species
Ceric.34G006100.1 Ceric.34G006100 substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
GSVIVT01012508001 RPT3, NPH3, JK218 Root phototropism protein 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01035968001 MAB4, NPY1, ENP BTB/POZ domain-containing protein NPY1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_04489 No alias BTB/POZ domain-containing protein At1g67900... 0.05 OrthoFinder output from all 47 species
Gb_32606 No alias BTB/POZ domain-containing protein At1g67900... 0.03 OrthoFinder output from all 47 species
LOC_Os03g10800.2 NPY2, LOC_Os03g10800 BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp5g03480.1 No alias BTB/POZ domain-containing protein At1g67900... 0.02 OrthoFinder output from all 47 species
Nbi_g10804 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Pir_g65173 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0145.g023009 No alias not classified & original description: CDS=496-1932 0.05 OrthoFinder output from all 47 species
Sam_g38846 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Solyc03g044090.4.1 NPY2, Solyc03g044090 BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc05g013570.3.1 Solyc05g013570 BTB/POZ domain-containing protein At1g67900... 0.04 OrthoFinder output from all 47 species
Solyc10g047530.2.1 RPT3, NPH3,... component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.05 OrthoFinder output from all 47 species
Spa_g14756 RPT3, NPH3, JK218 substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Tin_g07210 No alias substrate adaptor of CUL3-based E3 ubiquiTin ligase... 0.04 OrthoFinder output from all 47 species
Zm00001e014998_P003 Zm00001e014998 BTB/POZ domain-containing protein At1g67900... 0.04 OrthoFinder output from all 47 species
Zm00001e033674_P003 Zm00001e033674 BTB/POZ domain-containing protein At5g47800... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR027356 NPH3_dom 219 498
IPR000210 BTB/POZ_dom 26 116
No external refs found!