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  5. Spa_g47018

Spa_g47018


Description : not classified & original description: none


Gene families : OG0000530 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000530_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g47018
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Ala_g23333 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15290 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42341.t1 Aspi01Gene42341 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g01949 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G081200.1 Ceric.14G081200 not classified & original description: pacid=50633525... 0.04 OrthoFinder output from all 47 species
Ceric.36G035300.1 Ceric.36G035300 not classified & original description: pacid=50568281... 0.04 OrthoFinder output from all 47 species
Len_g46085 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g26890 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g13682 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g51013 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g13770 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g24513 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08659 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12714 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g07296 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12288 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR012442 DUF1645_plant 106 394
No external refs found!