Spa_g46370


Description : not classified & original description: none


Gene families : OG0004557 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004557_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g46370

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00080p00083910 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT5G60150 No alias unknown protein; Has 1807 Blast hits to 1807 proteins in... 0.03 OrthoFinder output from all 47 species
Als_g12841 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g51318 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene01997.t1 Aspi01Gene01997 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G025400.1 Ceric.05G025400 not classified & original description: pacid=50579034... 0.02 OrthoFinder output from all 47 species
Dcu_g36728 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12302 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g20091 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06780 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g13719 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08123 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008156 negative regulation of DNA replication IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0045005 DNA-templated DNA replication maintenance of fidelity IEP HCCA
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0048478 replication fork protection IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051053 negative regulation of DNA metabolic process IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090329 regulation of DNA-templated DNA replication IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:2000104 negative regulation of DNA-templated DNA replication IEP HCCA

No InterPro domains available for this sequence

No external refs found!