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  5. Spa_g45712

Spa_g45712 (PDR6, ATPDR6)


Aliases : PDR6, ATPDR6

Description : subfamily ABCG transporter & original description: none


Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g45712
Cluster HCCA: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00185210 PDR6, ATPDR6,... Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
AMTR_s00122p00120860 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AT1G66950 PDR11, ATPDR11 pleiotropic drug resistance 11 0.02 OrthoFinder output from all 47 species
Aop_g06909 ABCG40, PDR12,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20545 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g76765 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z322800.1 PDR6, ATPDR6,... subfamily ABCG transporter & original description:... 0.03 OrthoFinder output from all 47 species
Cre16.g655450 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.01 OrthoFinder output from all 47 species
Dac_g37574 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g49905 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01016993001 ATPDR7, PDR7 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
GSVIVT01016998001 PDR1, ATPDR1 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
GSVIVT01017187001 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
GSVIVT01017201001 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
GSVIVT01024743001 ATPDR3, PDR3 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
GSVIVT01031314001 PIS1, ABCG37,... Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
GSVIVT01031377001 PDR6, ATPDR6 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Gb_33043 ABCG40, PDR12,... subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Gb_34309 ATPDR3, PDR3 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
LOC_Os01g42350.1 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
LOC_Os07g33780.1 PDR6, ATPDR6,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
LOC_Os08g29570.1 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
LOC_Os09g16449.1 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
MA_10430834g0010 PEN3, ABCG36,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
MA_135152g0010 PEN3, ABCG36,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
MA_17319g0020 ABCG40, PDR12,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
MA_42871g0010 PEN3, ABCG36,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
MA_84624g0010 ATPDR7, PDR7 subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
Mp2g21800.1 PEN3, ABCG36,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Ore_g22919 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g39006 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0025.g009396 PDR11, ATPDR11 subfamily ABCG transporter & original description: CDS=1-4197 0.03 OrthoFinder output from all 47 species
Smo115821 PEN3, ABCG36,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Smo96758 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Solyc02g081870.4.1 ATPDR3, PDR3,... abscisic acid transporter (ABCG31). subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Solyc05g053610.2.1 ABCG40, PDR12,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Solyc12g019620.2.1 ABCG40, PDR12,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Solyc12g098210.3.1 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Tin_g02910 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g16992 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e027850_P001 ABCG40, PDR12,... subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
Zm00001e033689_P001 PDR11, ATPDR11,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Zm00001e039353_P001 PIS1, ABCG37,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
InterPro domains Description Start Stop
IPR013581 PDR_assoc 402 467
IPR003439 ABC_transporter-like_ATP-bd 561 713
IPR043926 ABCG_dom 64 117
IPR013525 ABC_2_trans 185 397
No external refs found!