Heatmap: Cluster_173 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Young Sterile Leaflet
Mature Sterile Leaflet
Fertile Leaflet
Young Primary Rachis
Mature Primary Rachis
Young Petiole
Mature Petiole
Crozier
Rhizome
Root
- - 2.82 - -3.76 - - 1.43 -2.66 -
-0.18 -7.8 2.61 -4.15 -3.37 -3.44 -2.58 0.74 -0.76 -1.64
-1.34 - 2.84 - - - - 1.09 -1.65 -
-1.42 -2.17 2.42 -1.21 -0.64 -1.18 -1.25 0.61 -1.59 -1.92
-0.21 -0.17 2.41 -3.02 -2.71 -2.51 -3.62 0.12 -0.67 -0.57
-0.99 -0.81 1.97 -1.71 -1.0 -2.02 -0.84 0.81 0.28 -1.24
Spa_g06572 (BMY2)
0.03 -1.2 1.91 -1.16 -0.79 -0.78 -0.88 0.16 -0.31 -0.5
Spa_g07464 (LOF1)
-0.46 - 2.89 - - -5.42 - 0.02 -0.51 -3.29
-2.58 - 3.01 - - - - 0.65 -3.14 -3.68
Spa_g09122 (PDR12)
0.11 -4.65 2.55 - -2.14 -1.97 -2.0 0.85 -1.22 -3.73
Spa_g09971 (DSI-1VOC)
-1.7 -4.59 2.17 -2.43 -0.85 -2.24 -0.98 0.73 0.25 -0.24
-1.22 -1.9 2.66 -5.57 -3.07 -6.35 -4.0 1.01 -0.44 -7.37
Spa_g10304 (HEN1)
-0.47 -1.54 1.79 -0.57 -1.51 -0.69 -1.48 0.58 -0.0 -0.02
- - 3.11 - - -5.65 - 0.35 -3.56 -
Spa_g11053 (BEH3)
- - 3.06 - - -4.31 - 0.67 - -
0.08 -2.06 2.24 -2.56 -1.03 -2.59 -0.94 0.02 0.07 -0.81
Spa_g13395 (LFY)
-1.06 -2.92 2.47 -2.6 -2.19 -1.55 -1.93 -0.1 0.27 -0.5
-1.47 -1.74 1.94 -1.42 -0.02 -2.6 -0.23 0.57 -0.25 -0.34
Spa_g18235 (LFY)
-0.23 -0.95 2.29 -1.68 -1.45 -1.75 -1.51 -0.04 -0.05 -1.08
-1.44 -1.36 2.61 -4.19 -2.39 -4.28 -1.85 0.7 -0.66 -1.65
Spa_g30415 (AGO1)
-0.5 -0.47 1.32 -0.36 -0.54 -0.42 -0.55 0.32 0.18 -0.3
-1.04 -1.36 2.45 -0.9 -1.56 -1.58 -1.49 0.12 -0.62 -1.49
Spa_g39479 (TEL1)
-4.26 -8.06 2.46 -5.8 -5.08 -4.72 -4.33 1.24 0.2 -0.31
Spa_g39609 (RPT1)
-2.42 -3.29 2.46 -1.6 -3.6 -1.68 -2.94 0.74 0.2 -0.92
-2.16 - 3.09 - - - - 0.15 -2.98 -
Spa_g44826 (PDR6)
-0.37 -3.78 2.51 -2.76 -1.93 -2.26 -1.52 0.77 -1.42 -1.26
- - 2.81 -3.6 -3.39 - -0.39 1.03 - -
Spa_g45567 (HMA4)
0.04 - 2.69 -0.77 -2.71 -1.75 - 0.2 -3.3 -2.08
Spa_g45700 (HMA4)
-0.44 -6.44 2.76 -1.82 - -1.99 - 0.45 -6.67 -0.78
Spa_g45712 (PDR6)
-0.01 -3.64 2.47 -2.72 -2.11 -1.97 -2.2 0.95 -1.51 -2.01
-1.29 -1.1 2.57 -2.19 -1.6 -1.57 -0.81 -0.14 -0.74 -2.22
Spa_g46892 (ERL1)
-1.36 - 3.02 -6.05 -7.38 -6.55 -8.23 0.15 -1.96 -3.21
-0.64 -1.08 2.36 -2.43 -0.86 -2.5 -1.33 0.73 -0.66 -2.71
- - 3.13 - - - -3.55 0.11 - -3.14
-0.38 -0.37 1.16 -0.59 -0.28 -0.34 -0.06 0.19 -0.01 -0.23
-0.61 -2.86 1.88 -2.35 -0.47 -1.95 -0.42 0.79 0.32 -0.68
Spa_g48274 (GRF5)
-0.55 -2.01 2.67 -6.04 - - - 1.14 -1.06 -6.72
-3.74 -6.21 2.68 -5.46 -5.43 -4.38 - 1.02 0.2 -2.04
-0.28 - 2.7 -4.4 - - - 1.1 -1.25 -3.96
-0.27 -0.47 2.05 -1.71 -1.23 -0.84 -1.26 0.28 -0.15 -1.04
Spa_g49551 (CRB)
-3.26 -2.66 2.37 -1.06 -3.6 -2.35 -2.18 0.21 0.41 0.14
-0.72 -4.0 2.96 -5.68 - - - 0.5 - -3.1
-3.41 -5.66 2.79 -1.43 - -0.74 -2.34 0.21 -1.53 -1.76
-1.71 -6.67 2.6 -2.84 -6.08 -2.77 -4.89 1.11 -0.62 -1.07
0.33 - 2.41 - -1.69 -1.71 -1.62 0.52 -0.22 -2.2

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.