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  4. Sequence
  5. Spa_g45638

Spa_g45638


Description : not classified & original description: none


Gene families : OG0007939 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007939_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g45638
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
Nbi_g35914 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g05469 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g18238 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g21907 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g21918 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g38986 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g45742 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g49979 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
MF GO:0008184 glycogen phosphorylase activity IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR000533 Tropomyosin 60 283
No external refs found!