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Description : regulatory factor *(TZF) of mRNA stress granule formation & original description: none
Gene families : OG0000156 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000156_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Spa_g43052 | |
| Cluster | HCCA: Cluster_21 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G40140 | SZF2, ATSZF2, ZFAR1, CZF1 | zinc finger (CCCH-type) family protein | 0.06 | OrthoFinder output from all 47 species | |
| AT3G55980 | ATSZF1, SZF1 | salt-inducible zinc finger 1 | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g033634 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g038163 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g045996 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g046911 | ATTZF1, ATCTH | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g049127 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g075797 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g105087 | ATTZF1, ATCTH | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g05467 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g05322 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.06 | OrthoFinder output from all 47 species | |
| Als_g01096 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g47721 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g60899 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g07949 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g14168 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g21643 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene04702.t1 | Aspi01Gene04702 | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene68944.t1 | Aspi01Gene68944 | regulatory factor *(TZF) of mRNA stress granule... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0203.g057679 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g03345 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.04G078500.1 | Ceric.04G078500 | regulatory factor *(TZF) of mRNA stress granule... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.05G100900.1 | Ceric.05G100900 | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.17G002100.1 | ATTZF1, ATCTH,... | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.1Z168000.1 | ATTZF1, ATCTH,... | regulatory factor *(TZF) of mRNA stress granule... | 0.04 | OrthoFinder output from all 47 species | |
| Cre03.g146267 | ATTZF1, ATCTH | RNA biosynthesis.transcriptional activation.C3H zinc... | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g10045 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g22345 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g03161 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g16518 | ATTZF1, ATCTH | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g38463 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g25533 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01024728001 | No alias | RNA biosynthesis.transcriptional activation.C3H zinc... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01032807001 | SZF2, ATSZF2, ZFAR1, CZF1 | RNA biosynthesis.transcriptional activation.C3H zinc... | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os01g09620.1 | LOC_Os01g09620 | mRNA-binding regulatory factor (TZF) | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os05g03760.1 | LOC_Os05g03760 | mRNA-binding regulatory factor (TZF) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os05g10670.1 | LOC_Os05g10670 | mRNA-binding regulatory factor (TZF) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os07g38090.2 | LOC_Os07g38090 | mRNA-binding regulatory factor (TZF) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os12g33090.1 | LOC_Os12g33090 | mRNA-binding regulatory factor (TZF) | 0.01 | OrthoFinder output from all 47 species | |
| Len_g18302 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g02270 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g28211 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_11306g0010 | No alias | mRNA-binding regulatory factor (TZF) | 0.03 | OrthoFinder output from all 47 species | |
| Mp6g00540.1 | No alias | mRNA-binding regulatory factor (TZF) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g10175 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g15902 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g15903 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.1 | OrthoFinder output from all 47 species | |
| Nbi_g05906 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g10809 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.07 | OrthoFinder output from all 47 species | |
| Ore_g35856 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g05173 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g16736 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g20981 | ATTZF1, ATCTH | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g25039 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g10785 | ATTZF1, ATCTH | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0008.g004066 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0030.g010425 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g052570.3.1 | SZF2, ATSZF2,... | mRNA-binding regulatory factor (TZF) | 0.09 | OrthoFinder output from all 47 species | |
| Solyc06g082010.4.1 | Solyc06g082010 | mRNA-binding regulatory factor (TZF) | 0.05 | OrthoFinder output from all 47 species | |
| Solyc09g014644.1.1 | PEI1, Solyc09g014644 | mRNA-binding regulatory factor (TZF) | 0.01 | OrthoFinder output from all 47 species | |
| Solyc12g008660.1.1 | Solyc12g008660 | mRNA-binding regulatory factor (TZF) | 0.01 | OrthoFinder output from all 47 species | |
| Spa_g15791 | ATTZF1, ATCTH | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e016582_P001 | Zm00001e016582 | mRNA-binding regulatory factor (TZF) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e027454_P001 | ATTZF1, ATCTH,... | mRNA-binding regulatory factor (TZF) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e027566_P001 | Zm00001e027566 | mRNA-binding regulatory factor (TZF) | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e029465_P001 | Zm00001e029465 | mRNA-binding regulatory factor (TZF) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| MF | GO:0051287 | NAD binding | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |