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  5. Spa_g42474

Spa_g42474 (GATL3)


Aliases : GATL3

Description : galacturonosyltransferase & original description: none


Gene families : OG0000478 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000478_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g42474
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Ceric.36G035500.1 GATL3, Ceric.36G035500 galacturonosyltransferase & original description:... 0.04 OrthoFinder output from all 47 species
Dcu_g09474 GATL7 galacturonosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g50600.1 GATL9, LGT8,... galacturonosyltransferase 0.03 OrthoFinder output from all 47 species
Nbi_g02917 GATL3 galacturonosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g10729 GATL7 galacturonosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g14559 GATL7 galacturonosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g45115 GATL7 galacturonosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12326 GATL3 galacturonosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13778 GATL7 galacturonosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e007430_P001 GATL3, Zm00001e007430 galacturonosyltransferase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016757 glycosyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002495 Glyco_trans_8 98 353
No external refs found!