Spa_g42471


Description : not classified & original description: none


Gene families : OG0000394 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000394_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g42471

Target Alias Description ECC score Gene Family Method Actions
AT1G55170 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
Adi_g057285 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058242 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g079468 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g079469 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g115133 No alias component *(FLX) of FRI-C transcription effector complex... 0.03 OrthoFinder output from all 47 species
Als_g06056 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g36862 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05107 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene07155.t1 Aspi01Gene07155 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008747 No alias not classified & original description: CDS=358-1209 0.03 OrthoFinder output from all 47 species
Azfi_s0037.g025871 No alias not classified & original description: CDS=411-1265 0.03 OrthoFinder output from all 47 species
Cba_g06272 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g01495 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g09930 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g12870 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g28318 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g07745 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g12440 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g15202 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g12142 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g11301 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g07996 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g09049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29327 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29329 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33152 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g00322 No alias component *(FLX) of FRI-C transcription effector complex... 0.03 OrthoFinder output from all 47 species
Pir_g02228 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11645 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03724 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g065630.4.1 Solyc02g065630 Protein FLX-like 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g16924 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05949 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26867 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0031369 translation initiation factor binding IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!