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  5. Spa_g42263

Spa_g42263


Description : not classified & original description: none


Gene families : OG0000085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g42263
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
AT2G35140 No alias DCD (Development and Cell Death) domain protein 0.02 OrthoFinder output from all 47 species
AT5G42050 No alias DCD (Development and Cell Death) domain protein 0.03 OrthoFinder output from all 47 species
Adi_g007222 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g007845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g088779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g089291 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g128031 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15133 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44436.t1 Aspi01Gene44436 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20204 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11066 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g02056 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02597 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03573 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04719 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g19156 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_32889 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 274.0) 0.03 OrthoFinder output from all 47 species
LOC_Os05g07220.1 LOC_Os05g07220 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 112.0) 0.02 OrthoFinder output from all 47 species
LOC_Os06g07770.1 LOC_Os06g07770 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g31430 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g35170 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g07327 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12957 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04078 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0050.g013885 No alias not classified & original description: CDS=1-2919 0.02 OrthoFinder output from all 47 species
Smo91200 No alias B2 protein OS=Daucus carota 0.02 OrthoFinder output from all 47 species
Zm00001e020733_P001 Zm00001e020733 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 266.0) 0.03 OrthoFinder output from all 47 species
Zm00001e031056_P001 Zm00001e031056 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR013989 Dev_and_cell_death_domain 130 214
No external refs found!