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  5. Spa_g42117

Spa_g42117


Description : not classified & original description: none


Gene families : OG0007731 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007731_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g42117

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00046p00132680 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Aop_g18334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0054.g033740 No alias not classified & original description: CDS=126-5105 0.03 OrthoFinder output from all 47 species
Dcu_g04996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_29908 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004143 diacylglycerol kinase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR022031 Rif1_N 38 336
No external refs found!