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  5. Spa_g42104

Spa_g42104


Description : component *(EAF1) of NuA4 histone acetyltransferase complex & original description: none


Gene families : OG0001880 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001880_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g42104
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
AT3G24870 No alias Helicase/SANT-associated, DNA binding protein 0.03 OrthoFinder output from all 47 species
AT3G24880 No alias Helicase/SANT-associated, DNA binding protein 0.05 OrthoFinder output from all 47 species
Adi_g034080 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.04 OrthoFinder output from all 47 species
Adi_g107358 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.04 OrthoFinder output from all 47 species
Aev_g04897 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.03 OrthoFinder output from all 47 species
Aspi01Gene02961.t2 Aspi01Gene02961 component *(EAF1) of NuA4 histone acetyltransferase... 0.04 OrthoFinder output from all 47 species
Aspi01Gene02964.t1 Aspi01Gene02964 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.1Z107100.1 Ceric.1Z107100 component *(EAF1) of NuA4 histone acetyltransferase... 0.08 OrthoFinder output from all 47 species
Dcu_g44993 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.06 OrthoFinder output from all 47 species
Ehy_g16159 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.02 OrthoFinder output from all 47 species
GSVIVT01028685001 No alias Chromatin modification-related protein EAF1 A... 0.04 OrthoFinder output from all 47 species
Gb_31226 No alias component EAF1 of NuA4 histone acetyltransferase complex 0.05 OrthoFinder output from all 47 species
LOC_Os05g51550.1 LOC_Os05g51550 Chromatin modification-related protein EAF1 B... 0.02 OrthoFinder output from all 47 species
LOC_Os08g08000.1 LOC_Os08g08000 component EAF1 of NuA4 histone acetyltransferase complex 0.05 OrthoFinder output from all 47 species
MA_31176g0010 No alias component EAF1 of NuA4 histone acetyltransferase complex 0.04 OrthoFinder output from all 47 species
Mp2g02900.1 No alias component EAF1 of NuA4 histone acetyltransferase complex 0.02 OrthoFinder output from all 47 species
Msp_g36976 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.04 OrthoFinder output from all 47 species
Nbi_g05491 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.03 OrthoFinder output from all 47 species
Pir_g12255 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.05 OrthoFinder output from all 47 species
Ppi_g42118 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.03 OrthoFinder output from all 47 species
Sam_g36096 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.04 OrthoFinder output from all 47 species
Smo424802 No alias Chromatin modification-related protein EAF1 B... 0.03 OrthoFinder output from all 47 species
Solyc06g083420.3.1 Solyc06g083420 component EAF1 of NuA4 histone acetyltransferase complex 0.03 OrthoFinder output from all 47 species
Solyc09g060080.4.1 Solyc09g060080 component EAF1 of NuA4 histone acetyltransferase complex 0.04 OrthoFinder output from all 47 species
Tin_g13754 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.04 OrthoFinder output from all 47 species
Zm00001e020520_P002 Zm00001e020520 component EAF1 of NuA4 histone acetyltransferase complex 0.05 OrthoFinder output from all 47 species
Zm00001e020521_P001 Zm00001e020521 component EAF1 of NuA4 histone acetyltransferase complex 0.02 OrthoFinder output from all 47 species
Zm00001e026671_P001 Zm00001e026671 component EAF1 of NuA4 histone acetyltransferase complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR014012 HSA_dom 603 646
IPR001005 SANT/Myb 1027 1077
No external refs found!