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  5. Spa_g42084

Spa_g42084


Description : not classified & original description: none


Gene families : OG0000490 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000490_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g42084

Target Alias Description ECC score Gene Family Method Actions
Als_g28467 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20523.t1 Aspi01Gene20523 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27519.t1 Aspi01Gene27519 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27603.t1 Aspi01Gene27603 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene70951.t1 Aspi01Gene70951 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020830.125 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g00901 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g16877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g08854 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g23066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 198 251
IPR002110 Ankyrin_rpt 269 353
IPR011646 KAP_P-loop 545 581
No external refs found!