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  5. Spa_g40841

Spa_g40841


Description : deubiquitinase *(OTU6-12) & original description: none


Gene families : OG0001215 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001215_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g40841
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
Dcu_g11926 No alias deubiquitinase *(OTU6-12) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38151 No alias deubiquitinase *(OTU6-12) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25586 No alias deubiquitinase *(OTU6-12) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011614_P001 Zm00001e011614 C85 Otubain cysteine protease 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR003323 OTU_dom 188 277
No external refs found!