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  5. Spa_g39905

Spa_g39905 (ATUBC1, UBC1)


Aliases : ATUBC1, UBC1

Description : E2 ubiquitin-conjugating enzyme *(UBC1) & original description: none


Gene families : OG0001764 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001764_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g39905
Cluster HCCA: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
AT1G14400 ATUBC1, UBC1 ubiquitin carrier protein 1 0.03 OrthoFinder output from all 47 species
Adi_g067091 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.02 OrthoFinder output from all 47 species
Als_g13260 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.03 OrthoFinder output from all 47 species
Ceric.07G043600.1 ATUBC1, UBC1,... E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000737.3 ATUBC1, UBC1 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Cre06.g294850 ATUBC1, UBC1 Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01008045001 ATUBC2, UBC2 Protein degradation.peptide tagging.Ubiquitin... 0.06 OrthoFinder output from all 47 species
GSVIVT01011359001 ATUBC2, UBC2 Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01022467001 ATUBC2, UBC2 Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
LOC_Os07g07240.1 ATUBC2, UBC2,... ubiquitin-conjugating E2 protein 0.02 OrthoFinder output from all 47 species
Lfl_g35735 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.02 OrthoFinder output from all 47 species
Mp8g17960.1 ATUBC1, UBC1 ubiquitin-conjugating E2 protein 0.05 OrthoFinder output from all 47 species
Msp_g29008 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.04 OrthoFinder output from all 47 species
Nbi_g23706 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.05 OrthoFinder output from all 47 species
Pp3c12_9550V3.1 ATUBC1, UBC1, Pp3c12_9550 ubiquiting-conjugating enzyme 2 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004566 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006114 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.03 OrthoFinder output from all 47 species
Solyc02g067420.3.1 ATUBC2, UBC2,... ubiquitin-conjugating E2 protein 0.03 OrthoFinder output from all 47 species
Spa_g14710 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.02 OrthoFinder output from all 47 species
Spa_g14711 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e011475_P001 ATUBC2, UBC2,... ubiquitin-conjugating E2 protein 0.04 OrthoFinder output from all 47 species
Zm00001e032886_P001 ATUBC2, UBC2,... ubiquitin-conjugating E2 protein 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 64 200
No external refs found!