Spa_g39904 (MGP)


Aliases : MGP

Description : C2H2 subclass IDD transcription factor & original description: none


Gene families : OG0000265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000265_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g39904

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00106830 IDD2, AtIDD2,... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 OrthoFinder output from all 47 species
AT2G01940 ATIDD15, SGR5 C2H2-like zinc finger protein 0.04 OrthoFinder output from all 47 species
Adi_g012803 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g099246 NUC not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g117237 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ala_g26273 MGP C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aob_g37976 MGP C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.17G030700.1 MGP, Ceric.17G030700 C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g07841 AtIDD7, IDD7 C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01019000001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
GSVIVT01031112001 IDD2, AtIDD2 RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
Gb_17209 IDD16, AtIDD16 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os01g09850.1 AtIDD7, IDD7,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os01g39110.1 AtIDD7, IDD7,... C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os01g70870.1 IDD2, AtIDD2,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os03g10140.1 LOC_Os03g10140 C2H2 zinc finger transcription factor. elicitor peptide... 0.03 OrthoFinder output from all 47 species
LOC_Os07g39310.1 MGP, LOC_Os07g39310 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os09g27650.2 IDD14, AtIDD14,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Mp1g15660.1 IDD16, AtIDD16 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Ore_g16325 MGP C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g33896 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pnu_g09916 MGP C2H2 subclass IDD transcription factor & original... 0.06 OrthoFinder output from all 47 species
Pnu_g20764 MGP C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0066.g016076 MGP C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0107.g020376 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sam_g26816 No alias C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sam_g40123 No alias C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g15231 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g18185 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Zm00001e004751_P001 AtIDD7, IDD7,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e018716_P001 MGP, Zm00001e018716 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e034317_P001 IDD14, AtIDD14,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP HCCA
MF GO:0005247 voltage-gated chloride channel activity IEP HCCA
MF GO:0005253 monoatomic anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006821 chloride transport IEP HCCA
MF GO:0008308 voltage-gated monoatomic anion channel activity IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0010274 hydrotropism IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015108 chloride transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR013087 Znf_C2H2_type 56 78
No external refs found!