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  5. Spa_g39858

Spa_g39858


Description : not classified & original description: none


Gene families : OG0000866 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000866_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g39858
Cluster HCCA: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
Aob_g22442 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g62576 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g35925 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36215 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36853 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g38093 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g38100 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31943 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g32167 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g20903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g35633 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g43132 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g28711 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g39011 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g40954 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006448 regulation of translational elongation IEP HCCA
BP GO:0006449 regulation of translational termination IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0010628 positive regulation of gene expression IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0034250 positive regulation of amide metabolic process IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
BP GO:0043243 positive regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043244 regulation of protein-containing complex disassembly IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045727 positive regulation of translation IEP HCCA
BP GO:0045901 positive regulation of translational elongation IEP HCCA
BP GO:0045905 positive regulation of translational termination IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051130 positive regulation of cellular component organization IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051247 positive regulation of protein metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000270 PB1_dom 10 74
No external refs found!