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  5. Spa_g39670

Spa_g39670 (CHUP1)


Aliases : CHUP1

Description : not classified & original description: none


Gene families : OG0001103 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001103_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g39670

Target Alias Description ECC score Gene Family Method Actions
AT1G07120 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.03 OrthoFinder output from all 47 species
Adi_g036037 CHUP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010340 CHUP1 not classified & original description: CDS=1-3261 0.03 OrthoFinder output from all 47 species
Dac_g36487 CHUP1 motility factor *(CHUP) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017698001 No alias Protein CHUP1, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os01g46340.1 LOC_Os01g46340 regulatory protein (IPGA) of cortical microtubule organisation 0.02 OrthoFinder output from all 47 species
Len_g21976 CHUP1 motility factor *(CHUP) & original description: none 0.02 OrthoFinder output from all 47 species
MA_62967g0010 CHUP1 Protein CHUP1, chloroplastic OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g21271 CHUP1 motility factor *(CHUP) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g38296 CHUP1 motility factor *(CHUP) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034755 iron ion transmembrane transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!