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  5. Spa_g39658

Spa_g39658


Description : EC_3.2 glycosylase & original description: none


Gene families : OG0000452 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000452_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g39658
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
AT1G80170 No alias Pectin lyase-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G57510 ADPG1 Pectin lyase-like superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g32139 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04943 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01784 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44829.t1 Aspi01Gene44829 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.05G027300.1 Ceric.05G027300 EC_3.2 glycosylase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.38G004300.1 Ceric.38G004300 EC_3.2 glycosylase & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g11602 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03879 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g37611 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g20917 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g25659 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01008062001 No alias Polygalacturonase OS=Juniperus ashei 0.03 OrthoFinder output from all 47 species
GSVIVT01013800001 No alias Cell wall.pectin.modification and... 0.02 OrthoFinder output from all 47 species
GSVIVT01017305001 No alias Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01017644001 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01028189001 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01031298001 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01032114001 QRT2 Polygalacturonase OS=Actinidia deliciosa 0.02 OrthoFinder output from all 47 species
GSVIVT01032117001 QRT2 Cell wall.pectin.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01032118001 QRT2 Cell wall.pectin.modification and... 0.02 OrthoFinder output from all 47 species
GSVIVT01032447001 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_07779 No alias Polygalacturonase OS=Actinidia deliciosa... 0.03 OrthoFinder output from all 47 species
LOC_Os01g19170.1 LOC_Os01g19170 Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os11g14400.1 LOC_Os11g14400 Polygalacturonase OS=Prunus persica... 0.02 OrthoFinder output from all 47 species
Len_g55532 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17901 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g19271 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g45275 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g24091 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g15323 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g014560.3.1 Solyc08g014560 Polygalacturonase OS=Prunus persica... 0.02 OrthoFinder output from all 47 species
Spa_g54713 No alias polygalacturonase *(PGX1-like) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e006091_P001 ADPG2, PGAZAT,... polygalacturonase (QRT2) 0.04 OrthoFinder output from all 47 species
Zm00001e026240_P001 Zm00001e026240 Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 108 432
No external refs found!