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  5. Spa_g39479

Spa_g39479 (TEL1)


Aliases : TEL1

Description : not classified & original description: none


Gene families : OG0003402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003402_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g39479
Cluster HCCA: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0090.g042632 TEL1 not classified & original description: CDS=1-3177 0.05 OrthoFinder output from all 47 species
Dac_g14075 TEL1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_68449g0010 TEL1 Protein terminal ear1 homolog OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Msp_g31301 TEL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g26220 TEL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g013930.2.1 TEL1, Solyc05g013930 Protein terminal ear1 OS=Zea mays (sp|o65001|te1_maize : 355.0) 0.05 OrthoFinder output from all 47 species
Solyc05g056360.2.1 MCT1, Solyc05g056360 Protein terminal ear1 homolog OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Tin_g44662 TEL1 not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 554 617
IPR007201 Mei2-like_Rrm_C 813 921
No external refs found!