1. Home
  2. Species
  3. Stenochlaena palustris
  4. Sequence
  5. Spa_g38568

Spa_g38568


Description : 2S globulin seed storage protein & original description: none


Gene families : OG0000380 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000380_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g38568
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00062800 evm_27.TU.AmTr_v1... Chitinase 2 OS=Tulipa bakeri 0.05 OrthoFinder output from all 47 species
Als_g37029 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05703.t1 Aspi01Gene05703 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.1Z192700.1 Ceric.1Z192700 2S globulin seed storage protein & original description:... 0.04 OrthoFinder output from all 47 species
Dde_g09037 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g07954 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g18287 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18288 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e004770_P001 Zm00001e004770 no description available(sp|q7m443|chit2_tulsb : 315.0) 0.03 OrthoFinder output from all 47 species
Zm00001e021310_P001 Zm00001e021310 no description available(sp|q7m443|chit2_tulsb : 281.0) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
InterPro domains Description Start Stop
IPR001223 Glyco_hydro18_cat 110 287
IPR018392 LysM_dom 33 75
No external refs found!