Heatmap: Cluster_2 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Young Sterile Leaflet
Mature Sterile Leaflet
Fertile Leaflet
Young Primary Rachis
Mature Primary Rachis
Young Petiole
Mature Petiole
Crozier
Rhizome
Root
-0.32 -0.29 0.64 -4.3 -4.5 - -3.72 2.22 0.83 -2.21
-1.95 -1.75 -1.76 - - - -1.97 2.7 0.85 -0.75
- - -2.1 - - - - 1.46 2.76 -1.99
-1.41 - -1.24 -3.51 -5.71 -4.29 - 1.03 2.79 -3.17
- - - - - - - 1.56 2.73 -1.32
-5.09 -4.25 -1.11 -8.25 -5.39 - -2.56 1.61 2.62 -4.43
-2.48 -1.4 -0.71 -2.17 -3.89 -1.69 -2.5 2.03 1.27 0.65
-3.82 - -2.84 -1.57 - -3.91 - 1.6 2.41 0.06
-2.97 -2.09 -2.91 -3.36 -5.57 - - 1.96 2.46 -
-2.14 -0.34 -0.2 -4.08 -2.38 -5.11 -2.07 1.87 1.91 -2.46
-1.29 -0.51 -3.35 -1.44 -4.53 -2.32 - 2.41 1.49 -4.28
- -3.69 -2.62 - -2.92 -4.55 -0.71 2.43 1.53 -0.49
-3.03 -1.8 0.44 -3.58 -3.95 -2.11 -2.14 0.77 2.16 0.54
- - - - - - - 2.67 1.76 -1.95
- -5.62 -2.1 -5.91 -5.85 - - 2.28 2.25 -3.12
- - -4.15 - - - - 1.88 2.53 -1.1
-6.68 -7.73 1.19 -7.84 -4.55 -7.63 -4.37 1.12 2.36 -1.78
-2.02 -2.18 -2.85 -2.44 -3.75 -2.42 -2.03 2.67 0.8 -0.72
-3.38 - -0.97 - - - - 2.49 1.92 -
-1.02 -2.0 -0.4 -2.35 -0.14 -1.28 -0.11 1.48 1.2 -0.06
-4.05 -4.35 -1.25 -3.05 -2.46 -3.7 -1.24 2.0 1.68 0.55
-0.67 -2.56 -1.31 -3.34 -3.32 -3.57 -2.49 2.35 1.26 -0.24
-1.91 -3.89 -1.58 - -2.44 -2.82 - 1.7 2.47 -2.2
-1.75 - -0.25 - - - - 1.12 2.73 -4.19
-3.1 - - -0.91 - -2.23 -3.25 2.05 2.04 -0.35
Spa_g03420 (ACA7)
-3.27 -10.53 -0.08 -8.45 -9.15 -8.91 -3.68 1.46 2.61 -5.77
Spa_g03421 (ACA7)
-2.04 -4.64 -0.28 -8.53 -10.87 -8.33 -7.68 1.87 2.38 -5.26
-0.87 - -2.56 -1.68 -1.87 -3.71 -0.67 1.99 1.73 -0.47
- - - - -0.79 -1.14 -1.77 2.12 2.12 -
-0.25 -0.19 -0.09 -0.19 -0.4 -0.2 -0.36 0.9 0.38 -0.15
Spa_g04987 (TSBtype2)
-2.21 -2.43 0.67 -1.66 -2.34 -1.58 -1.75 1.7 1.52 -0.42
Spa_g05601 (CXE17)
-3.71 -4.43 -1.68 -7.0 -2.78 - -1.62 0.83 2.3 1.24
-1.31 -0.28 -1.78 -1.24 -1.73 -1.14 -3.54 2.07 1.51 -2.61
-0.35 - - - - - - 1.55 2.65 -
-1.27 -2.01 -1.54 -3.22 -2.29 -3.42 -2.07 2.56 0.89 -0.79
-5.0 -1.94 -3.11 -2.39 -0.14 -2.51 0.08 2.22 1.16 -1.47
-2.69 -1.04 -1.06 -2.88 -2.96 -2.89 -1.31 1.09 2.56 -4.36
Spa_g06557 (SPL2)
-2.27 -3.9 -1.34 -0.37 -1.02 -0.26 -0.8 1.53 1.63 -0.57
Spa_g06731 (UPM1)
-0.44 -1.28 -0.07 -0.83 -0.78 -0.73 -0.16 1.08 1.09 0.02
Spa_g06750 (AFB2)
-2.72 -1.52 0.1 -1.74 -0.19 -1.21 -0.17 1.38 1.41 -0.55
Spa_g06923 (VTC2)
-0.85 -0.57 -0.73 -0.32 -0.09 -0.38 -0.09 1.2 0.71 -0.35
Spa_g06975 (CPK13)
-2.42 - -4.13 -1.94 -2.77 -1.36 -2.68 2.11 1.65 0.43
-1.48 -2.58 -1.73 0.13 -2.22 -0.05 -2.54 1.08 2.0 -0.73
Spa_g08142 (JAR1)
-0.78 - -1.1 - - - - 2.31 1.95 -2.79
-1.06 -0.08 -0.37 -1.46 -2.28 -1.7 -1.62 1.81 0.96 0.2
-4.28 -5.99 -0.89 -5.21 -4.18 -5.23 -3.5 1.93 2.12 0.05
Spa_g08896 (ACX1)
-2.95 -4.25 -3.27 -1.84 -2.23 -1.59 -1.51 2.33 1.71 -2.18
-8.29 - -1.03 -9.57 - - -8.06 2.28 2.21 -5.7
-0.52 -0.62 0.18 -0.33 -0.19 -0.24 -0.09 0.76 0.51 -0.08
-0.06 -7.23 -0.81 -2.63 -6.22 -3.43 -5.5 2.3 1.64 -3.07
-0.91 -1.68 -0.36 -0.3 -0.22 -0.37 -0.09 1.08 1.01 -0.22
- - - - - -2.67 - 2.19 2.15 -0.25
-3.51 -4.32 -0.29 -6.42 - -3.38 -4.38 2.14 1.92 -0.49
-3.92 -2.14 -1.4 -5.15 - -3.59 -4.11 2.02 1.68 0.92
-3.99 0.26 -1.67 -2.31 -0.28 -1.69 -0.32 1.72 1.33 -1.05
-3.01 - -1.26 -2.3 -5.48 -2.82 -3.14 2.51 1.62 -2.37
-4.97 -5.63 -2.18 -7.67 -6.02 -5.52 -3.52 2.34 2.12 -2.42
-0.23 - 1.29 -4.18 - -4.93 -6.29 0.8 2.07 -0.59
-3.36 -0.62 -2.39 -3.94 -0.57 -1.9 -0.76 2.09 1.56 -2.13
-0.55 -0.24 -0.19 -1.11 -1.22 -1.0 -1.24 1.43 0.96 0.19
-1.46 -1.89 0.78 -5.46 -5.98 -7.78 -6.05 1.08 2.45 -5.93
-3.07 -0.69 -1.39 -1.62 -0.58 -0.97 -0.82 1.4 1.63 0.09
-1.81 -2.66 -0.2 -1.54 -0.72 -0.7 -0.1 1.74 1.19 -0.82
Spa_g15540 (AFB2)
-1.59 0.07 -0.59 -1.0 -0.48 -0.66 -0.1 1.28 1.07 -0.64
Spa_g16034 (SK13)
-0.54 -0.56 0.13 -0.33 -0.29 -0.12 -0.23 0.86 0.58 -0.24
-5.84 -1.86 -2.9 -4.17 0.08 -3.45 0.67 2.03 1.16 -1.13
Spa_g17047 (NAC3)
-5.99 -2.23 -1.8 -1.74 -0.2 -1.96 0.41 1.48 1.53 0.07
-1.53 0.31 -0.94 -3.47 -2.66 -5.02 -2.08 2.24 1.41 -7.03
-0.96 -2.05 -0.32 -4.64 -0.59 -4.86 -0.55 2.3 0.74 -1.18
-0.56 -0.89 -3.25 -1.59 - -2.76 - 2.18 1.85 -3.66
-1.73 -1.54 -1.47 -2.36 -1.68 -2.3 -1.83 1.61 2.08 -0.49
-0.48 -4.0 -1.34 -3.38 -2.94 -3.42 -2.06 2.17 1.92 -6.73
-0.93 0.35 -0.07 -1.53 -1.95 -1.47 -1.71 1.76 0.63 0.07
-0.51 -0.25 0.91 -2.63 -2.95 -3.37 -2.83 1.83 1.11 -1.61
-8.18 -9.48 -3.26 -9.95 -9.66 -11.04 -7.64 2.21 2.39 -8.31
Spa_g22405 (BRS1)
-2.24 -3.65 0.07 -1.21 -1.18 -1.2 -1.05 1.4 2.01 -2.28
0.09 -0.36 0.96 -3.03 -3.08 -2.91 -2.52 1.81 0.85 -1.47
- -4.62 - - -1.57 -3.06 -0.7 1.9 2.32 -2.49
-0.85 -1.23 0.07 -0.99 -0.09 -0.77 0.41 0.83 0.74 0.21
-3.36 -5.04 0.65 -2.25 -3.19 -2.43 -1.73 1.1 1.83 0.84
-0.64 -1.93 -0.59 -3.67 -0.51 -3.47 -0.41 2.17 0.85 -0.97
-0.93 -1.37 -0.31 -0.66 -0.6 -0.44 -0.15 1.4 0.99 -0.48
-0.27 -3.03 0.05 -0.76 -1.19 -0.87 -1.38 1.58 0.88 0.29
-1.78 -3.24 -0.87 -1.64 -0.58 -1.89 -0.26 1.49 1.65 0.02
-1.85 -1.53 -1.45 -2.56 -0.4 -2.13 -1.06 1.72 1.88 -1.33
-1.72 -1.83 -0.6 -2.49 -1.06 -2.54 -1.11 1.7 1.91 -1.12
-2.17 - -3.21 - - - - 2.03 2.45 -3.1
-4.5 -2.6 -0.27 -5.32 -2.04 -4.83 -2.54 2.03 1.98 -1.11
-4.46 -6.9 -0.21 - - - - 1.83 2.47 -
0.22 -0.44 -0.84 -2.2 -3.61 -3.49 -3.53 2.23 0.93 -1.12
-0.72 - -0.32 - -2.86 - -1.64 1.54 2.09 -0.06
-2.74 -0.37 -0.23 -4.51 -0.65 -3.37 0.01 1.92 1.25 -1.85
-3.14 - -3.02 -2.88 - - -0.9 2.42 1.9 -
-2.46 -3.04 0.39 - -2.7 -2.81 -2.89 1.9 1.98 -1.83
- - -3.31 - - - - 2.81 1.53 -
Spa_g29170 (CYTC-2)
-1.22 -4.99 -1.4 -5.39 -3.92 -4.41 -3.58 2.5 1.47 -0.97
Spa_g29333 (CYP709B2)
-2.09 -1.28 0.23 -0.67 -1.07 -0.88 -0.61 1.02 1.35 0.37
Spa_g29354 (RCD3)
-2.5 -1.78 -0.19 -1.98 -1.42 -1.69 -1.01 1.13 2.27 -2.19
Spa_g29408 (ALDH2B)
-4.81 -3.75 -2.87 -0.51 -0.88 -0.44 -0.4 1.78 1.64 -1.08
-9.36 - -5.26 -4.51 -7.19 -5.11 - 2.03 2.53 -6.39
-2.36 -2.78 -2.43 - - -3.8 - 1.88 2.51 -4.64
Spa_g29934 (CYP709B2)
-1.64 -0.89 0.16 -0.79 -0.85 -0.76 -0.57 1.02 1.33 0.12
Spa_g30072 (STP9)
-0.79 -0.98 -0.17 -0.39 -0.56 -0.56 -0.11 1.5 0.68 -0.86
-2.09 - -3.17 -0.89 -6.49 -2.86 -2.68 1.84 1.83 0.72
Spa_g30665 (ABI1)
-0.35 -1.01 -0.27 -1.1 -0.12 -1.28 0.03 1.44 0.66 -0.34
Spa_g30696 (LOX3)
-7.71 - -4.96 - -4.85 -5.49 -5.02 1.85 2.4 0.0
Spa_g30697 (LOX4)
-4.79 -4.99 -2.24 -2.86 -0.56 -2.5 -0.07 1.23 2.28 -0.79
-2.31 - -0.4 -2.48 -1.56 -1.42 -0.46 2.14 1.49 -2.24
- - -1.2 - - - - 1.45 2.73 -2.32
-7.43 - -7.37 - -3.95 -7.46 -6.44 2.88 1.31 -3.84
Spa_g30834 (XTR7)
-7.79 -8.96 -4.75 -6.02 -4.05 -6.24 -4.68 2.67 1.77 -4.15
-2.59 -2.09 -1.06 -2.56 -2.64 -2.45 -3.47 1.14 2.62 -2.68
-0.46 -1.16 -0.25 -0.2 -0.65 -0.32 -0.49 0.93 1.13 -0.2
Spa_g31194 (WRKY24)
- -3.2 -3.68 -4.37 -0.95 -4.89 -0.19 1.72 2.09 -0.32
Spa_g31993 (ARR9)
- -6.4 -2.05 - -5.04 -5.24 -2.54 1.77 2.12 0.8
-1.45 -2.95 -0.92 -2.11 -2.13 -1.77 -1.85 2.17 1.57 -1.09
-5.16 -4.13 -2.41 -2.88 -0.83 -3.31 -0.38 1.37 2.27 -0.43
-0.85 -1.95 0.03 -0.85 -0.24 -0.88 -0.06 1.18 0.9 0.17
-4.37 -4.72 0.42 -3.29 -5.26 -1.8 -2.91 2.18 1.51 -0.65
-1.2 -0.1 -3.24 -1.66 -2.14 -1.41 -1.27 2.06 1.55 -3.39
Spa_g36387 (REF1)
- -4.48 -3.49 -0.95 -0.85 -0.69 -1.15 2.23 1.33 -0.91
Spa_g37116 (EIF3B)
-4.52 -8.27 -4.16 -9.31 -7.53 -8.44 -4.83 1.65 2.43 0.39
-0.52 -8.95 -0.59 -3.91 -4.56 -3.55 -4.16 2.13 1.9 -1.94
-2.23 -3.31 -2.31 -2.33 -3.75 -2.84 - 2.49 1.25 0.12
-0.29 -5.11 -2.53 -1.33 -3.27 -1.42 -4.67 1.22 2.21 0.16
-1.0 -0.3 -0.65 -0.87 -0.32 -0.62 -0.36 1.5 0.91 -0.84
-0.46 -4.02 -0.47 -1.48 -3.88 -1.65 -3.16 1.01 2.36 -1.05
-1.27 -7.31 -1.13 -1.33 -3.84 -1.45 -6.53 2.18 1.33 0.3
Spa_g40236 (LOX3)
-6.11 - -3.31 - - -6.25 - 1.55 2.75 -2.2
-3.79 -4.39 -2.8 -0.8 -0.08 -1.16 0.12 2.18 0.86 -1.6
-0.72 -2.18 -0.49 -4.47 -0.77 -5.3 -0.72 2.3 0.84 -1.06
-0.77 -2.07 -1.43 -1.69 -1.21 -2.99 -1.63 1.83 1.89 -1.56
- -0.78 0.54 -4.61 -0.81 -3.73 -0.42 1.44 1.37 0.3
-1.74 -1.86 -0.52 -2.54 -0.15 -2.68 0.24 1.87 0.88 -0.31
-0.87 -0.54 -0.68 -0.49 -0.07 -0.57 -0.09 1.23 0.79 -0.35
-1.45 -2.48 -0.78 -1.91 -1.52 -1.82 -1.17 2.32 0.96 -0.76
Spa_g47654 (bHLH121)
-0.55 -0.98 -0.18 -0.27 -0.42 -0.38 -0.27 1.0 0.96 -0.32
-3.73 - -0.38 -5.07 -7.49 -7.23 -5.73 1.96 2.36 -3.55
-3.02 -0.19 -1.0 -5.68 -0.3 -2.58 -0.43 1.98 1.27 -1.31
Spa_g48554 (EXL2)
-2.31 -5.52 -2.2 -2.79 -3.01 -4.06 -3.83 2.22 2.01 -1.07
Spa_g48664 (BAM1)
-3.25 -2.52 -0.43 -1.48 -0.86 -1.39 -0.12 1.28 1.62 0.33
Spa_g48753 (SK13)
-0.26 -0.8 0.22 -0.23 -0.43 -0.11 -0.32 0.88 0.59 -0.39
-0.21 -0.62 0.44 -3.62 -3.01 -3.43 -2.77 1.97 1.22 -1.16
Spa_g49065 (JAZ2)
-2.55 -3.82 -0.58 -0.83 -1.68 -0.73 -1.27 1.2 2.0 -0.15
Spa_g49121 (MYC2)
-3.1 -1.57 0.01 -1.93 0.09 -1.53 0.05 1.52 0.9 0.14
-5.69 -6.8 -0.85 -8.97 - - -10.52 1.83 2.54 -5.78
Spa_g49572 (TPS7)
-1.76 -0.29 -2.36 -1.87 -3.34 -2.41 -3.48 2.43 1.11 -1.0
- - -1.06 - - - -9.48 1.9 2.53 -
-2.95 -1.29 -0.16 -2.59 -0.6 -2.05 0.05 1.2 1.58 0.24
-0.15 -0.21 -0.52 -1.05 -0.52 -0.63 -0.29 1.52 0.73 -1.46
-1.09 -0.83 -5.47 -3.24 -3.51 -5.48 -3.09 2.45 1.36 -0.77
-1.48 -0.92 0.22 -1.18 -1.96 -1.11 -1.76 1.7 0.7 0.7
-0.55 -2.29 - -0.3 -0.52 -1.55 -0.73 2.2 0.92 -2.64
-5.57 -11.18 -2.66 -8.76 - -12.4 -9.37 2.29 2.3 -6.99
-0.73 -0.16 0.18 -0.72 -1.07 -0.62 -1.37 1.16 0.69 0.5
-2.51 - - -1.36 -3.61 -0.54 -0.0 2.29 1.01 -0.35
-2.02 -0.73 0.4 -1.33 -0.2 -1.23 -0.26 1.3 0.8 0.11
-0.88 -3.0 -0.24 -0.7 -2.9 -1.83 -3.05 1.08 2.23 -0.91
-0.59 -0.19 -0.22 -1.15 -1.16 -1.08 0.12 1.23 1.19 -0.99
-5.08 - -0.1 -3.5 -4.27 -3.02 -3.6 2.22 1.84 -1.17
Spa_g55530 (TPS5)
-1.28 -0.74 -2.46 -1.56 -3.17 -2.32 -1.99 2.47 0.8 -0.73
-1.17 -4.64 -1.33 -0.47 -2.18 -1.32 -2.57 1.13 2.28 -0.82
-4.12 -6.61 0.08 -3.13 -4.45 -2.87 -4.65 2.31 1.57 -0.68
Spa_g57383 (ROXY2)
-3.26 - -0.41 -3.62 -3.81 -5.15 -3.29 2.28 1.82 -1.02

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.