Spa_g38540


Description : component *(RPP2) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0000449 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000449_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g38540
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
Adi_g120804 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Aev_g10020 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Als_g32713 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Aob_g12008 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Aob_g13413 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Aob_g38766 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Aob_g41855 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Aob_g41857 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Aop_g53455 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Aop_g54536 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Cba_g78021 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 39 species
Cba_g78022 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Dac_g45601 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Dcu_g31492 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Dde_g29156 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 39 species
Dde_g38145 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Dde_g42112 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Ehy_g16097 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Ehy_g16099 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Ehy_g28115 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 39 species
Lfl_g18042 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Nbi_g21745 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Nbi_g22542 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Nbi_g34091 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 39 species
Nbi_g34093 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Nbi_g34094 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 39 species
Nbi_g42560 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Nbi_g43551 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Nbi_g43995 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Pir_g61076 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Ppi_g10605 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 39 species
Ppi_g21216 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Ppi_g30045 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Ppi_g30046 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 39 species
Ppi_g37633 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Ppi_g42305 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Ppi_g44489 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Sam_g31433 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Sam_g47565 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Tin_g36177 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Tin_g36178 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!