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  5. Spa_g38163

Spa_g38163


Description : not classified & original description: none


Gene families : OG0005304 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005304_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g38163
Cluster HCCA: Cluster_210

Target Alias Description ECC score Gene Family Method Actions
Als_g49629 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g12347 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.10G057000.1 Ceric.10G057000 not classified & original description: pacid=50611979... 0.03 OrthoFinder output from all 47 species
Dac_g32139 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g39226 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g47320 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e001915_P001 Zm00001e001915 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
CC GO:0005685 U1 snRNP IEP HCCA
BP GO:0006376 mRNA splice site selection IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019107 myristoyltransferase activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR019147 SWAP_N_domain 41 177
No external refs found!