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  5. Spa_g37327

Spa_g37327


Description : E3 ubiquitin ligase *(PIR) & original description: none


Gene families : OG0001288 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001288_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g37327

Target Alias Description ECC score Gene Family Method Actions
Als_g01005 No alias E3 ubiquitin ligase *(PIR) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene31036.t1 Aspi01Gene31036 E3 ubiquitin ligase *(PIR) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31537.t1 Aspi01Gene31537 E3 ubiquitin ligase *(PIR) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75390 No alias E3 ubiquitin ligase *(PIR) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g07306 No alias E3 ubiquitin ligase *(PIR) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g08136 No alias E3 ubiquitin ligase *(PIR) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06315 No alias E3 ubiquitin ligase *(PIR) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03976 No alias E3 ubiquitin ligase *(PIR) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016744 transketolase or transaldolase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR046527 PIR2-like_helical 167 278
No external refs found!