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  5. Spa_g37259

Spa_g37259


Description : not classified & original description: none


Gene families : OG0000676 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000676_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g37259
Cluster HCCA: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
AT4G27400 No alias Late embryogenesis abundant (LEA) protein-related 0.04 OrthoFinder output from all 47 species
AT5G60520 No alias Late embryogenesis abundant (LEA) protein-related 0.02 OrthoFinder output from all 47 species
AT5G60530 No alias late embryogenesis abundant protein-related / LEA protein-related 0.04 OrthoFinder output from all 47 species
Adi_g003941 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g053480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g081710 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g106139 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g19245 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g27649 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g27787 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25371 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Ala_g26781 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Als_g21227 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g35626 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g38060 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g51912 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g21266 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g21377 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g33248 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g59886 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Aspi01Gene14746.t1 Aspi01Gene14746 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14749.t1 Aspi01Gene14749 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14750.t1 Aspi01Gene14750 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59477.t1 Aspi01Gene59477 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0001.g000108 No alias not classified & original description: CDS=110-1192 0.03 OrthoFinder output from all 47 species
Azfi_s0478.g073054 No alias not classified & original description: CDS=1-1137 0.04 OrthoFinder output from all 47 species
Azfi_s2640.g112481 No alias not classified & original description: CDS=1-1137 0.04 OrthoFinder output from all 47 species
Ceric.10G068800.1 Ceric.10G068800 not classified & original description: pacid=50613531... 0.05 OrthoFinder output from all 47 species
Ceric.10G068900.1 Ceric.10G068900 not classified & original description: pacid=50613305... 0.04 OrthoFinder output from all 47 species
Ceric.26G032000.1 Ceric.26G032000 not classified & original description: pacid=50599460... 0.09 OrthoFinder output from all 47 species
Ceric.26G032300.1 Ceric.26G032300 not classified & original description: pacid=50600130... 0.06 OrthoFinder output from all 47 species
Dcu_g28701 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g29247 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g31810 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ehy_g10721 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_08582 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g73700.1 LOC_Os01g73700 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g73710.1 LOC_Os01g73710 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g73720.1 LOC_Os01g73720 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g73730.1 LOC_Os01g73730 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g01680.1 LOC_Os05g01680 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g47940.1 LOC_Os05g47940 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g05360.1 LOC_Os11g05360 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g22428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g35928 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g21317 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g39989 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_558137g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_63925g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_6494080g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_6771381g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_74876g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_7605738g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_8427244g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_8955g0010 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
MA_957739g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g11810.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp7g08760.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mpzg00310.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g31244 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c11_5670V3.1 Pp3c11_5670 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c1_3090V3.1 Pp3c1_3090 No annotation 0.02 OrthoFinder output from all 47 species
Ppi_g33257 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Solyc02g078930.3.1 Solyc02g078930 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc08g066590.3.1 Solyc08g066590 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc11g069280.2.1 Solyc11g069280 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g37296 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e002062_P001 Zm00001e002062 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e018525_P001 Zm00001e018525 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e018526_P001 Zm00001e018526 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e018527_P001 Zm00001e018527 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e021386_P001 Zm00001e021386 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e024129_P001 Zm00001e024129 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e029686_P001 Zm00001e029686 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e038073_P001 Zm00001e038073 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR009646 Root_cap 301 357
No external refs found!