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  5. Spa_g36300

Spa_g36300


Description : not classified & original description: none


Gene families : OG0000085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g36300
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00077180 evm_27.TU.AmTr_v1... B2 protein OS=Daucus carota 0.02 OrthoFinder output from all 47 species
Adi_g003400 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004478 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g086088 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g087066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113900 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g115740 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g05248 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07932 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g15010 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g07809 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09280 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g14540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18305 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g30702 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0579.g078279 No alias not classified & original description: CDS=29-1684 0.03 OrthoFinder output from all 47 species
Ceric.15G041200.1 Ceric.15G041200 not classified & original description: pacid=50639654... 0.03 OrthoFinder output from all 47 species
Ceric.1Z076400.1 Ceric.1Z076400 not classified & original description: pacid=50565862... 0.04 OrthoFinder output from all 47 species
Ceric.28G013700.1 Ceric.28G013700 not classified & original description: pacid=50569930... 0.07 OrthoFinder output from all 47 species
GSVIVT01001088001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01030266001 No alias B2 protein OS=Daucus carota 0.04 OrthoFinder output from all 47 species
Gb_00306 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_04338 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 90.9) 0.02 OrthoFinder output from all 47 species
Len_g36163 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11033 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g22859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10429587g0010 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 92.8) 0.02 OrthoFinder output from all 47 species
MA_121889g0010 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 98.2) 0.05 OrthoFinder output from all 47 species
Mp1g21920.1 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 92.4) 0.02 OrthoFinder output from all 47 species
Ore_g03607 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g08808 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15717 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g13338 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g28263 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09271 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g005570.4.1 Solyc06g005570 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 81.6) 0.04 OrthoFinder output from all 47 species
Tin_g08253 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g09126 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e023900_P003 Zm00001e023900 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e030859_P001 Zm00001e030859 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR013989 Dev_and_cell_death_domain 117 184
No external refs found!