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  4. Sequence
  5. Spa_g34819

Spa_g34819


Description : not classified & original description: none


Gene families : OG0004312 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004312_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g34819

Target Alias Description ECC score Gene Family Method Actions
AT3G02120 No alias hydroxyproline-rich glycoprotein family protein 0.02 OrthoFinder output from all 47 species
Adi_g016964 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32387 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aob_g12718 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10509 No alias not classified & original description: none 0.16 OrthoFinder output from all 47 species
Aspi01Gene26216.t1 Aspi01Gene26216 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Azfi_s0003.g008107 No alias not classified & original description: CDS=566-952 0.01 OrthoFinder output from all 47 species
Cba_g00383 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.27G022500.1 Ceric.27G022500 not classified & original description: pacid=50605994... 0.11 OrthoFinder output from all 47 species
Dac_g12700 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Dac_g16238 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g42889 No alias not classified & original description: none 0.19 OrthoFinder output from all 47 species
GSVIVT01032906001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_03841 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Gb_26295 No alias no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Len_g15554 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Lfl_g22213 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Lfl_g40624 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
MA_16252g0010 No alias no hits & (original description: none) 0.13 OrthoFinder output from all 47 species
Mp1g00810.1 No alias no hits & (original description: none) 0.14 OrthoFinder output from all 47 species
Nbi_g02600 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Sam_g22942 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Solyc02g088830.4.1 Solyc02g088830 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Tin_g24396 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g32711 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g41878 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009262 deoxyribonucleotide metabolic process IEP HCCA
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!