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  5. Spa_g34258

Spa_g34258


Description : not classified & original description: none


Gene families : OG0010451 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0010451_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g34258
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
Nbi_g32893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g33590 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g06032 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g15372 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g46407 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g47139 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g36904 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
InterPro domains Description Start Stop
IPR006616 DM9_repeat 37 149
IPR006616 DM9_repeat 111 158
No external refs found!