Spa_g32584


Description : not classified & original description: none


Gene families : OG0001501 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001501_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g32584

Target Alias Description ECC score Gene Family Method Actions
Adi_g067157 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g074465 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g116058 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g116314 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09800 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g11157 CRM3, HCF152 plastidial transcript stability factor *(HCF152) &... 0.02 OrthoFinder output from all 47 species
Dde_g09114 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g12469 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_34895 No alias Pentatricopeptide repeat-containing protein At1g69290... 0.04 OrthoFinder output from all 47 species
LOC_Os07g31310.1 LOC_Os07g31310 Pentatricopeptide repeat-containing protein At4g17616... 0.02 OrthoFinder output from all 47 species
Lfl_g02279 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_743669g0010 No alias Pentatricopeptide repeat-containing protein At1g03100,... 0.02 OrthoFinder output from all 47 species
MA_90791g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Pir_g63894 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015033 CRM3, HCF152 plastidial transcript stability factor *(HCF152) &... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 229 255
IPR002885 Pentatricopeptide_repeat 200 222
IPR002885 Pentatricopeptide_repeat 124 171
IPR002885 Pentatricopeptide_repeat 21 68
No external refs found!