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  5. Spa_g31118

Spa_g31118


Description : auxiliary VPS23-interacting component *(CFS1) of ESCRT-I complex & original description: none


Gene families : OG0000821 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000821_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g31118
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00011660 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G29800 No alias RING/FYVE/PHD-type zinc finger family protein 0.04 OrthoFinder output from all 47 species
AT3G43230 No alias RING/FYVE/PHD-type zinc finger family protein 0.02 OrthoFinder output from all 47 species
Ala_g06913 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g03200 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.03 OrthoFinder output from all 47 species
Ceric.01G077600.1 Ceric.01G077600 auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.03 OrthoFinder output from all 47 species
Ceric.20G075200.1 Ceric.20G075200 not classified & original description: pacid=50567423... 0.03 OrthoFinder output from all 47 species
Cre16.g668550 No alias No description available 0.05 OrthoFinder output from all 47 species
Dde_g01575 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.05 OrthoFinder output from all 47 species
Dde_g02242 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.06 OrthoFinder output from all 47 species
GSVIVT01015009001 No alias No description available 0.05 OrthoFinder output from all 47 species
Gb_38623 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os07g17130.1 LOC_Os07g17130 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g14701 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g03070 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.03 OrthoFinder output from all 47 species
Mp3g11370.1 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Msp_g11153 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g15854 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.03 OrthoFinder output from all 47 species
Nbi_g05825 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.04 OrthoFinder output from all 47 species
Ore_g05728 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.02 OrthoFinder output from all 47 species
Ore_g09436 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.03 OrthoFinder output from all 47 species
Ore_g36752 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g11792 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.03 OrthoFinder output from all 47 species
Ppi_g01148 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.03 OrthoFinder output from all 47 species
Solyc02g071980.3.1 Solyc02g071980 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e014385_P001 Zm00001e014385 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e033254_P004 Zm00001e033254 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e037246_P003 Zm00001e037246 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR007461 Ysc84_actin-binding 432 557
IPR000306 Znf_FYVE 251 316
No external refs found!